alphagenome.visualization.plot_transcripts.draw_interval

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alphagenome.visualization.plot_transcripts.draw_interval#

alphagenome.visualization.plot_transcripts.draw_interval(ax, interval, y, label=None, height=0.5, shift=0, label_color='#7f7f7f', **kwargs)[source]#

Draw rectangle patch on the axis given a genomic interval.

Parameters:

  • ax (Axes) – Matplotlib axis onto which to draw the interval.

  • interval (Interval) – Genomic interval to draw.

  • y (float) – Vertical position at which to draw the interval.

  • label (Optional[str] (default: None)) – Optional label to draw next to the interval.

  • height (float (default: 0.5)) – Height of the interval.

  • shift (int (default: 0)) – X-axis shift.

  • label_color (str (default: '#7f7f7f')) – Label color in hex string format.

  • **kwargs – Additional keyword arguments passed to matplotlib plotting functions.

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